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BaseInfo

ncRNA ID ath-miRf10890-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CUACUCGACCUGAGGGUCGAGUG - NA
Stem-loop(if miRNA)            GA           UCU   G  
CUACUCGACCU  GGGUCGAGUGG   CUU AGA
|||||||||||  |||||||||||   ||| ||U
GGUGAGCUGGG  UCCAGCUCAUC   GAA UCC
           UC           CUC   G  
Stem-loop sequence CUACUCGACCUGAGGGUCGAGUGGUCUCUUGAGAUCCUGAAGCUCCUACUCGACCUCUGGGUCGAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103391.1
ncRNA:23   GUGAGCUGGGAGUCCAGCUCAUC   1
  ||||||||||*||||||||||||
targets:1105   CACUCGACCCCCAGGUCGAGUAG   1127

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
BT025674.1
ncRNA:23   GUGAGCUGGGAGUCCAGCUCAUC   1
  =|||||||||*|||||||||||*
targets:188   UACUCGACCCCCAGGUCGAGUAA   210

2.5 Arabidopsis thaliana NA coding protein psRNATarget
EF183194.1
ncRNA:23   GUGAGCUGGGAGUCCAGCUCAUC   1
  |||||||||**||||||||||||
targets:450   CACUCGACCACCAGGUCGAGUAG   472

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget