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BaseInfo

ncRNA ID novel_egu_miR410
Species Elaeis guineensis
Class miRNA
Genome position Chr15:16557550-16557601 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 29 - AAGCGAAUAUGUCGGCGUUGGCUU - 52
Stem-loop(if miRNA) ---GA       G      C    GCC
     GAUGCCG ACAUAU CGCU   G
     ||||||| |||||| ||||
     UUGCGGC UGUAUA GCGA   A
UUCGG       -      A    ACC
Stem-loop sequence GAGAUGCCGGACAUAUCCGCUGCCGACCAAGCGAAUAUGUCGGCGUUGGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019853288.1
ncRNA:24   UUCGGUUGCGGCUGUAUAAGCGAA   1
  *=|||||=||||||||||||||||
targets:538   CGGCCAAUGCCGACAUAUUCGCUU   561

1.0 PREDICTED: Elaeis guineensis uncharacterized LOC109506353 (LOC109506353), partial mRNA NA coding protein psRNATarget