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BaseInfo

ncRNA ID	novel_egu_miR405
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr14:13876316-13876511 [-]
Reference genome	EG5
Source	SRR3042542
Length	24
Mature sequence(if miRNA)	1 - AGUAGUUUUGAAGUAGUAGAUCAU - 24
Stem-loop(if miRNA)	--AU                        -AACU               -ACAU    C   UC          A          A  UAUC     UAUU     UUUACUAUUUCAAAAUUAUUUGUA     AAAAGUUAUAUGAUU     AUCU UAG  UAUAUAUCAA UAGUCAAAAA UA    UAAUU    U     ||||||||||||||||||||||||     |||||||||||||||     |||| |||  |||||||||| |||||||||| ||    |||||     AGAUGAUGAAGUUUUGAUGAAUAU     UUUUUAGUAUACUAA     UAGA AUU  AUAUAUAGUU AUCAGUUUUU AU    AUUAA    U UACU                        GUAUU               ACUUC    A   GU          C          A  --CU     UUUU
Stem-loop sequence	AUUUUACUAUUUCAAAAUUAUUUGUAAACUAAAAGUUAUAUGAUUACAUAUCUCUAGUCUAUAUAUCAAAUAGUCAAAAAAUAUAUCUAAUUUAUUUUUUUUAAUUAUCUAAUUUUUGACUACUUGAUAUAUAUGUUAAAGAUCUUCAAAUCAUAUGAUUUUUUUAUGUAUAAGUAGUUUUGAAGUAGUAGAUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   UACUAGAUGAUGAAGUUUUGAUGA   1   =|||||||||=|*||||||||||| targets:3507   GUGAUCUACUGCCUCAAAACUACU   3530 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   UACUAGAUGAUGAAGUUUUGAUGA   1   =|||||||||=|*||||||||||| targets:3980   GUGAUCUACUGCCUCAAAACUACU   4003 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   UACUAGAUGAUGAAGUUUUGAUGA   1   =|||||||||=|*||||||||||| targets:3983   GUGAUCUACUGCCUCAAAACUACU   4006 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget