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BaseInfo

ncRNA ID novel_egu_miR403
Species Elaeis guineensis
Class miRNA
Genome position Chr14:22602847-22602925 [-]
Reference genome EG5
Source SRR3042542
Length 19
Mature sequence(if miRNA) 1 - CAGCAGGGGUCGACUCAUU - 19
Stem-loop(if miRNA) --               GGAAAAAUA  A      AAGG
  UGGGUCGACCUCUGU         GC AAAAAU    U
  |||||||||||||||         || ||||||    U
  ACUCAGCUGGGGACG         CG UUUUUA    C
UU               ACAAAAAUC  G      AUGU
Stem-loop sequence UGGGUCGACCUCUGUGGAAAAAUAGCAAAAAAUAAGGUUCUGUAAUUUUUGGCCUAAAAACAGCAGGGGUCGACUCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019853787.1
ncRNA:19   UUACUCAGCUGGGGACGAC   1
  =||||||*|||||||||||
targets:658   GAUGAGUGGACCCCUGCUG   676

2.5 PREDICTED: Elaeis guineensis eukaryotic translation initiation factor 3 subunit B (LOC105053887), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010935219.2
ncRNA:19   UUACUCAGCUGGGGACGAC   1
  =||||||*|||||||||||
targets:682   GAUGAGUGGACCCCUGCUG   700

2.5 PREDICTED: Elaeis guineensis eukaryotic translation initiation factor 3 subunit B (LOC105053887), transcript variant X2, mRNA NA coding protein psRNATarget