ncRNA ID | novel_egu_miR403 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr14:22602847-22602925 [-] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 19 |
Mature sequence(if miRNA) | 1 - CAGCAGGGGUCGACUCAUU - 19 |
Stem-loop(if miRNA) |
--               GGAAAAAUA  A      AAGG   UGGGUCGACCUCUGU         GC AAAAAU    U   |||||||||||||||         || ||||||    U   ACUCAGCUGGGGACG         CG UUUUUA    C UU               ACAAAAAUC  G      AUGU |
Stem-loop sequence | UGGGUCGACCUCUGUGGAAAAAUAGCAAAAAAUAAGGUUCUGUAAUUUUUGGCCUAAAAACAGCAGGGGUCGACUCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853787.1 |
|
2.5 | PREDICTED: Elaeis guineensis eukaryotic translation initiation factor 3 subunit B (LOC105053887), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010935219.2 |
|
2.5 | PREDICTED: Elaeis guineensis eukaryotic translation initiation factor 3 subunit B (LOC105053887), transcript variant X2, mRNA | NA | coding protein | psRNATarget |