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BaseInfo

ncRNA ID novel_egu_miR402
Species Elaeis guineensis
Class miRNA
Genome position Chr11:4733272-4733356 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AGGACAGACUCAACAAACUGAAGA - 24
Stem-loop(if miRNA) --      -  C   A            A   -----    UUCUC
  AGGACA GA UCA CAAACUGAAGAA GAU     GGUC     G
  |||||| || ||| |||||||||||| |||     ||||     A
  UUCUGU CU AGU GUUUGACUUUUU CUA     UCAG     A
AC      A  A   -            -   AACUU    UUACC
Stem-loop sequence AGGACAGACUCAACAAACUGAAGAAAGAUGGUCUUCUCGAACCAUUGACUUUCAAAUCUUUUUCAGUUUGUGAAUCAUGUCUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010911488.1
ncRNA:24   AGAAGUCAAACAACUCAGACAGGA   1
  *|||=||*|||||||||||||=||
targets:1320   GCUUUAGGUUGUUGAGUCUGUUCU   1343

2.5 PREDICTED: Elaeis guineensis ankyrin repeat domain-containing protein 2A (LOC105035787), mRNA NA coding protein psRNATarget