| ncRNA ID | novel_egu_miR400 |
| Species | Elaeis guineensis |
| Class | miRNA |
| Genome position | Chr14:19875871-19876024 [+] |
| Reference genome | EG5 |
| Source | SRR3042542 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - UUUUUUUGUGUUGAUCGGGCCACC - 24 |
| Stem-loop(if miRNA) |
-- G -A G GA G ---- G AGGG -------- G GACAGGAGGGGCCAGUGGCGCCACGAGGC UUUUUUUGU UUG UC GGCCACC GG G U G GG UU C C ||||||||| ||| || ||||||| || | | | || || | GAGGAGACA AGC GG UCGGUGG GC U U G GC AG C G GG G GG G GG - GGAG - ---- AAAACGGG - UGGUGGAGGAGCGGCCGGCUGGGGGAAGG |
| Stem-loop sequence | UUUUUUUGUGUUGAUCGGGCCACCGAGGGGUGGAGGGGGUUGCGACAGGAGGGGCCAGUGGCGCCACGAGGCCGGGAAGGGGGUCGGCCGGCGAGGAGGUGGUCGAGGGCAAAACGGUGAGGUCGGGGGUGGCUGGGGGCGAGACAGAGGAGGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GBSV01039542.1 |
|
2.0 | TSA: Elaeis guineensis Unigene21379_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_010935543.2 |
|
2.0 | PREDICTED: Elaeis guineensis myb-related protein 308-like (LOC105054112), mRNA | NA | coding protein | psRNATarget |