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BaseInfo

ncRNA ID novel_egu_miR398
Species Elaeis guineensis
Class miRNA
Genome position Chr14:17609207-17609265 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - UACUAGAAUUCACACAGACUGCAU - 24
Stem-loop(if miRNA) --          C  AC    U      AG
  UACUAGAAUU AC  AGAC GCAUUC  G
  |||||||||| ||  |||| ||||||
  AUGAUCUUAA UG  UCUG UGUGAG  U
AC          C  AC    -      CC
Stem-loop sequence UACUAGAAUUCACACAGACUGCAUUCAGGUCCGAGUGUGUCUCAGUCAAUUCUAGUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01051243.1
ncRNA:24   UACGUCAGACACACUUAAGAUCAU   1
  ***=**|||||*||||||||||||
targets:404   UAAUCUUCUGUUUGAAUUCUAGUA   427

2.5 TSA: Elaeis guineensis Unigene33085_All transcribed RNA sequence NA coding protein psRNATarget