ncRNA ID | novel_egu_miR393 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:21139570-21139668 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAACUGGAGAGAGAAGGUAGAG - 24 |
Stem-loop(if miRNA) |
AGAAACU       --         -------------------------                       GGAGAGA  GAAGGUAGA                         GAGAGGAGAGAAAGAA        |||||||  |||||||||                         |||||||||||||||A        UCUCUUU  UUUUUAUUU                         UUCUUCUCUCUUUUUA -------       UA         UUAUUUUUAUUUUAUUUUAUUUUUC                |
Stem-loop sequence | AGAAACUGGAGAGAGAAGGUAGAGAGAGGAGAGAAAGAAAAUUUUUCUCUCUUCUUCUUUUUAUUUUAUUUUAUUUUUAUUUUUAUUUUUAUUUUCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019854012.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105055185 (LOC105055185), mRNA | NA | coding protein | psRNATarget |