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BaseInfo

ncRNA ID novel_egu_miR391
Species Elaeis guineensis
Class miRNA
Genome position Chr13:21430427-21430500 [+]
Reference genome EG5
Source SRR3042542;SRR3042544;SRR3042545;SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 54 - CUGAAGUGUUUGGGGGAACUC - 74
Stem-loop(if miRNA) --                  U    -GC   -     U
  GUUCCCUCAGGCACUUCA UAGG   UGG UCCCC G
  |||||||||||||||||| ||||   ||| |||||
  CAAGGGGGUUUGUGAAGU AUCU   ACC AGGGG U
CU                  C    AAA   G     U
Stem-loop sequence GUUCCCUCAGGCACUUCAUUAGGGCUGGUCCCCUGUUGGGGAGCCAAAAUCUACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019848862.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  |||||||=||||||||||||*
targets:767   GAGUUCCUCCAAACACUUCAU   787

2.0 PREDICTED: Elaeis guineensis ATP sulfurylase 1, chloroplastic-like (LOC105042220), mRNA NA coding protein psRNATarget
GBSV01019820.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  *=|||||*||||||||||||*
targets:2830   AGGUUCCACCAAACACUUCAA   2850

2.0 TSA: Elaeis guineensis Unigene1648_All transcribed RNA sequence NA coding protein psRNATarget