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BaseInfo

ncRNA ID novel_egu_miR387
Species Elaeis guineensis
Class miRNA
Genome position Chr13:11086519-11086616 [+]
Reference genome EG5
Source SRR3042542
Length 21
Mature sequence(if miRNA) 1 - UGGAUCAAGUUGGGCAUGUCC - 21
Stem-loop(if miRNA) --  G   A               --AUA      GGGCCUUGUAAUCUG
  UG AUC AGUUGGGCAUGUCCU     AUUAGA               A
  || ||| |||||||||||||||     ||||||
  AC UAG UUAAUCUGUAUAGGA     CGUGGG               U
GA  G   A               GAAAA      GUUCCUUACGGAGUA
Stem-loop sequence UGGAUCAAGUUGGGCAUGUCCUAUAAUUAGAGGGCCUUGUAAUCUGAUAUGAGGCAUUCCUUGGGGUGCAAAAGAGGAUAUGUCUAAUUAGAUGCAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01045427.1
ncRNA:21   CCUGUACGGGUUGAACUAGGU   1
  **|||*||||||||||||||*
targets:189   AUACAAGCCCAACUUGAUCCU   209

2.0 TSA: Elaeis guineensis Unigene27268_All transcribed RNA sequence NA coding protein psRNATarget
XM_010925293.2
ncRNA:21   CCUGUACGGGUUGAACUAGGU   1
  |*||||*|||||=||||||||
targets:532   GAACAUUCCCAAUUUGAUCCA   552

2.5 PREDICTED: Elaeis guineensis UDP-glycosyltransferase 83A1-like (LOC105046641), mRNA NA coding protein psRNATarget