ncRNA ID | novel_egu_miR387 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr13:11086519-11086616 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGAUCAAGUUGGGCAUGUCC - 21 |
Stem-loop(if miRNA) |
--  G   A               --AUA      GGGCCUUGUAAUCUG   UG AUC AGUUGGGCAUGUCCU     AUUAGA               A   || ||| |||||||||||||||     ||||||   AC UAG UUAAUCUGUAUAGGA     CGUGGG               U GA  G   A               GAAAA      GUUCCUUACGGAGUA |
Stem-loop sequence | UGGAUCAAGUUGGGCAUGUCCUAUAAUUAGAGGGCCUUGUAAUCUGAUAUGAGGCAUUCCUUGGGGUGCAAAAGAGGAUAUGUCUAAUUAGAUGCAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01045427.1 |
|
2.0 | TSA: Elaeis guineensis Unigene27268_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010925293.2 |
|
2.5 | PREDICTED: Elaeis guineensis UDP-glycosyltransferase 83A1-like (LOC105046641), mRNA | NA | coding protein | psRNATarget |