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BaseInfo

ncRNA ID	novel_egu_miR386
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:3749-3867 [-]
Reference genome	EG5
Source	SRR3042542
Length	20
Mature sequence(if miRNA)	1 - AGGGUUUAGGGUUUAGGGUU - 20
Stem-loop(if miRNA)	--G      G      G       G UU          G       UU AG            UUUAGG UUUGGG UUUAGGG U  AGGGUUUGGG UUUGGGG  U  GGUUUUAGG    |||||| |||||| ||||||| |  |||||||||| |||||||  |  ||||||||G    GGAUUU GGAUUU GGAUUUU G  UUUCGGAUUU GGAUUUU  G  UUAGGAUUU UUG      G      G       G GU          A       GG AU
Stem-loop sequence	GUUUAGGGUUUGGGGUUUAGGGGUUUAGGGUUUGGGGUUUGGGGUUUAGGGUUUUAGGGUUUAGGAUUUAGGGUUUUAGGAUUUAGGCUUUUGGGUUUUAGGGUUUAGGGUUUAGGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010915958.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   ||=||||||||||||||||| targets:217   AAUCCUAAACCCUAAACCCU   236 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At1g79490, mitochondrial (LOC105039704), mRNA	NA	coding protein	psRNATarget
GBSV01037283.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   |||*|||||||||||||||| targets:121   AACACUAAACCCUAAACCCU   140 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene19119_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01021929.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   ||=||*|||||||||||||| targets:250   AAUCCCAAACCCUAAACCCU   269 Target Full Sequence	2.0	TSA: Elaeis guineensis Unigene3757_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010922512.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   =||*||=||||||||||||| targets:393   GACGCUGAACCCUAAACCCU   412 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis DEAD-box ATP-dependent RNA helicase 1 (LOC105044576), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010917149.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **|||*|||||||||||||| targets:223   CCCCCGAAACCCUAAACCCU   242 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis serine/threonine-protein phosphatase 5 (LOC105040568), mRNA	NA	coding protein	psRNATarget
XM_010938891.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   *||||*|||||||||||||* targets:46   CACCCAAAACCCUAAACCCC   65 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis 40S ribosomal protein S2-3-like (LOC105056627), mRNA	NA	coding protein	psRNATarget
GBSV01010568.1	ncRNA:20   UUGGGA--UUUGGGAUUUGGGA   1   =|||||--|||||||||||||| targets:109   GACCCUGUAAACCCUAAACCCU   130 Target Full Sequence	2.5	TSA: Elaeis guineensis CL3742.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010912641.2	ncRNA:20   UUGGGA--UUUGGGAUUUGGGA   1   =|||||--|||||||||||||| targets:191   GACCCUGUAAACCCUAAACCCU   212 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis box C/D snoRNA protein 1-like (LOC105036919), mRNA	NA	coding protein	psRNATarget
XM_019854561.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   =|||=|||||||||||*||| targets:161   GACCUUAAACCCUAAAGCCU   180 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis G patch domain-containing protein TGH homolog (LOC105056309), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_010942294.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **||||||||||*||||||| targets:87   CUCCCUAAACCCAAAACCCU   106 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis peptidyl-prolyl cis-trans isomerase CYP19-3 (LOC105059095), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01026008.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **||||||||||*||||||| targets:4   CUCCCUAAACCCAAAACCCU   23 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene7838_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01013625.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   |=||=*|||||||||||||| targets:119   AGCCUAAAACCCUAAACCCU   138 Target Full Sequence	3.0	TSA: Elaeis guineensis CL4960.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010930744.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   |=||=*|||||||||||||| targets:130   AGCCUAAAACCCUAAACCCU   149 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105050647 (LOC105050647), mRNA	NA	coding protein	psRNATarget
GBSV01013626.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   |=||=*|||||||||||||| targets:113   AGCCUAAAACCCUAAACCCU   132 Target Full Sequence	3.0	TSA: Elaeis guineensis CL4960.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010921670.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **|=|||||||||||||||* targets:275   CUCUCUAAACCCUAAACCCC   294 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis probable plastid-lipid-associated protein 3, chloroplastic (LOC105043943), mRNA	NA	coding protein	psRNATarget
XM_010929843.2	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **=||||||||||||||||* targets:97   UUUCCUAAACCCUAAACCCC   116 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis ribonuclease Z, chloroplastic (LOC105050004), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01009488.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **=||||||||||||||||* targets:85   UUUCCUAAACCCUAAACCCC   104 Target Full Sequence	3.0	TSA: Elaeis guineensis CL3323.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01009489.1	ncRNA:20   UUGGGAUUUGGGAUUUGGGA   1   **=||||||||||||||||* targets:73   UUUCCUAAACCCUAAACCCC   92 Target Full Sequence	3.0	TSA: Elaeis guineensis CL3323.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget