ncRNA ID | ath-miRf10887-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UGGUGAUGUCCUCUGCUCGACC - NA |
Stem-loop(if miRNA) |
    -U  AG    G   U -CU UG                     UCU   G   GAAG  GA  UGGU AUG C   C  CUCGACCAGGGGGUCGAGUGG   CUU AGA ||||  ||  |||| ||| |   |  |||||||||||||||||||||   ||| ||U CUUC  CU  ACUA UAC G   G  GAGCUGGUUCUCCAGCUCAUC   GAA UUC     UC  GG    G   U UUU GU                     CUC   G   |
Stem-loop sequence | GAAGUGAAGUGGUGAUGUCCUCUGCUCGACCAGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUUGGUCGAGUGGUUUGUCAUGAUCAGGUCCUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183042.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183194.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |