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BaseInfo

ncRNA ID novel_egu_miR379
Species Elaeis guineensis
Class miRNA
Genome position Chr1:51792399-51792464 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - ACUGCACUUAGGCACUAGACUACC - 24
Stem-loop(if miRNA) --           G  -  AGA   - -      U
  ACUGCACUUAG CA CU   CUA C CUGAAU U
  ||||||||||| || ||   ||| | |||||| C
  UGAUGUGGGUC GU GG   GGU G GACUUA U
AC           -  C  -AA   A U      A
Stem-loop sequence ACUGCACUUAGGCACUAGACUACCUGAAUUUCUAAUUCAGUGAUGGAAGGCUGCUGGGUGUAGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01010704.1
ncRNA:24   CCAUCAGAUCACGGAUUCACGUCA   1
  |||||||*||||||||||||||||
targets:76   GGUAGUCCAGUGCCUAAGUGCAGU   99

1.0 TSA: Elaeis guineensis CL3797.Contig2_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01010703.1
ncRNA:24   CCAUCAGAUCACGGAUUCACGUCA   1
  |||||||*||||||||||||||||
targets:143   GGUAGUCCAGUGCCUAAGUGCAGU   166

1.0 TSA: Elaeis guineensis CL3797.Contig1_All transcribed RNA sequence NA coding protein psRNATarget