ncRNA ID | novel_egu_miR379 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:51792399-51792464 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGCACUUAGGCACUAGACUACC - 24 |
Stem-loop(if miRNA) |
--           G  -  AGA   - -      U   ACUGCACUUAG CA CU   CUA C CUGAAU U   ||||||||||| || ||   ||| | |||||| C   UGAUGUGGGUC GU GG   GGU G GACUUA U AC           -  C  -AA   A U      A |
Stem-loop sequence | ACUGCACUUAGGCACUAGACUACCUGAAUUUCUAAUUCAGUGAUGGAAGGCUGCUGGGUGUAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01010704.1 |
|
1.0 | TSA: Elaeis guineensis CL3797.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01010703.1 |
|
1.0 | TSA: Elaeis guineensis CL3797.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |