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BaseInfo

ncRNA ID novel_egu_miR378
Species Elaeis guineensis
Class miRNA
Genome position Chr12:26733010-26733112 [-]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - UGGUGUAGAAAAUUCGAUGUGGAG - 24
Stem-loop(if miRNA) --                        C  A     C          A  UU
  CCACAUCGGAUUUUCUACACCGCC GU GUGCA AAAGAAUUUC CU  U
  |||||||||||||||||||||||| || ||||| |||||||||| ||  C
  GGUGUAGCUUAAAAGAUGUGGUGG CA CACGU UUUCUUAAAG GA  U
GA                        A  C     A          A  UU
Stem-loop sequence CCACAUCGGAUUUUCUACACCGCCCGUAGUGCACAAAGAAUUUCACUUUUCUUUAGAGAAAUUCUUUAUGCACCACAGGUGGUGUAGAAAAUUCGAUGUGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01016517.1
ncRNA:24   GAGGUGUAGCUUAAAAGAUGUGGU   1
  |||=||||||=||||||||=||||
targets:50   CUCUACAUCGGAUUUUCUAUACCA   73

2.5 TSA: Elaeis guineensis CL6194.Contig1_All transcribed RNA sequence NA coding protein psRNATarget