ncRNA ID | novel_egu_miR378 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:26733010-26733112 [-] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGUGUAGAAAAUUCGAUGUGGAG - 24 |
Stem-loop(if miRNA) |
--                        C  A     C          A  UU   CCACAUCGGAUUUUCUACACCGCC GU GUGCA AAAGAAUUUC CU  U   |||||||||||||||||||||||| || ||||| |||||||||| ||  C   GGUGUAGCUUAAAAGAUGUGGUGG CA CACGU UUUCUUAAAG GA  U GA                        A  C     A          A  UU |
Stem-loop sequence | CCACAUCGGAUUUUCUACACCGCCCGUAGUGCACAAAGAAUUUCACUUUUCUUUAGAGAAAUUCUUUAUGCACCACAGGUGGUGUAGAAAAUUCGAUGUGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01016517.1 |
|
2.5 | TSA: Elaeis guineensis CL6194.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |