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BaseInfo

ncRNA ID novel_egu_miR377
Species Elaeis guineensis
Class miRNA
Genome position Chr3:53782747-53782912 [+]
Reference genome EG5
Source SRR5189967
Length 21
Mature sequence(if miRNA) 146 - UCAUGCAUGAUUGUAGGCAUC - 166
Stem-loop(if miRNA) --CU           A        UG      U       AA    AGACUUAAAUUU    GA   AUUAA     A  C  U
    CCUACAAUCAU UAUGAAGG  CCUUCU GAAGGUU  UUUU            UGUU  UUU     CUCCU UU CG G
    ||||||||||| ||||||||  |||||| |||||||  ||||            ||||  |||     ||||| || ||
    GGAUGUUAGUA GUACUUCC  GGAAGG CUUCUAA  AAAA            ACAA  GAA     GAGGA GA GC A
CUAC           C        GU      U       AA    -GAAAACUAGCU    AA   -GAAA     A  A  A
Stem-loop sequence CUCCUACAAUCAUAUAUGAAGGUGCCUUCUUGAAGGUUAAUUUUAGACUUAAAUUUUGUUGAUUUAUUAACUCCUAUUCCGUGAACGAAGAAGGAGAAAGAAGAAAACAUCGAUCAAAAGAAAAAAAAUCUUCUGGAAGGUGCCUUCAUGCAUGAUUGUAGGCAUC