Search result

BaseInfo

ncRNA ID	novel_egu_miR363
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr2:48201771-48201967 [-]
Reference genome	EG5
Source	SRR5189967;SRR3042542;SRR3042544;SRR3042545;SRR3042547;SRR3042548
Length	24
Mature sequence(if miRNA)	1 - AAGCAGUUUUGAGGUAGUAGAUCA - 24
Stem-loop(if miRNA)	--       GU              C    C      C        C     CC   - GU              AU      A  U  UUAA     UU   AUCUAUU  CUCAAAAUUGUUUG ACAU AAAAAU AUAUGAUU GAAGA  UCU A  CUAUGUAUCAAGUG  CAAAAA UA AU    UUUAA  U   |||||||  |||||||||||||| |||| |||||| |||||||| |||||  ||| |  ||||||||||||||  |||||| || ||    |||||   UAGAUGA  GAGUUUUGACGAAC UGUA UUUUUA UAUACUAA CUUUU  AGA U  GAUACGUAGUUCAU  GUUUUU AU UG    GGAUU  U AC       UG              U    U      A        A     UA   A UG              CG      A  C  --UC     UA
Stem-loop sequence	AUCUAUUGUCUCAAAAUUGUUUGCACAUCAAAAAUCAUAUGAUUCGAAGACCUCUAGUCUAUGUAUCAAGUGAUCAAAAAAUAUAUUUAAUUUAAUUUUAUUUAGGCUGUCUAAUUUUUGGCUACUUGAUGCAUAGGUUAAGAAUUUUUCAAAUCAUAUAAUUUUUUAUGUUCAAGCAGUUUUGAGGUAGUAGAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3508   UGAUCUACUGCCUCAAAACUACUU   3531 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3981   UGAUCUACUGCCUCAAAACUACUU   4004 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3984   UGAUCUACUGCCUCAAAACUACUU   4007 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget