| ncRNA ID | ath-miR777 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr1:26638000-26638107 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 84 - UACGCAUUGAGUUUCGUUGCUU - 105 |
| Stem-loop(if miRNA) |
- A U -C UUAU GU C AGAGAGCAAC AAA UCAGUGUGUAUU GUUAAGA AAAUGU AUAA CGU C |||||||||| ||| |||||||||||| ||||||| |||||| |||| ||| UCUUUCGUUG UUU AGUUACGCAUAA CAAUUCU UUUACA UGUU GCG A C G U AA ---- -- U |
| Stem-loop sequence | AGAGAGCAACAAAAUCAGUGUGUAUUUGUUAAGACAAAUGUUUAUAUAAGUCGUCCAUGCGUUGUACAUUUAAUCUUAACUAAUACGCAUUGAGUUUCGUUGCUUUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_102745.1 |
|
2.5 | Arabidopsis thaliana COP1-interacting protein-like protein partial mRNA | COP1-interacting protein-like protein(AT1G30060) | coding protein | psRNATarget |
| 1 | PMID:16954541
"MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant"; Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC; Genome Res. 16:1276-1288(2006). |
| 2 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |
| 3 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |