ncRNA ID | novel_egu_miR353 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:21132529-21132645 [-] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGAAAUCGGAAUGGUCAAAUCCUU - 24 |
Stem-loop(if miRNA) |
---                      -GGGGUG        GU     ---AAAUUAAA  G    GAUUUGGCCAUUCCGAUUUUGG       UUUGAUUU  AACCG           AU A    ||||||||||||||||||||||       ||||||||  |||||           ||    CUAAACUGGUAAGGCUAAAGCU       AGGCUAAG  UUGGU           UA A UUC                      AAAGCUA        GU     AAAGAUAAAAG  A |
Stem-loop sequence | GAUUUGGCCAUUCCGAUUUUGGGGGGUGUUUGAUUUGUAACCGAAAUUAAAAUGAAAAUGAAAAUAGAAAUGGUUUGGAAUCGGAAUCGAAAUCGAAAUCGGAAUGGUCAAAUCCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853185.1 |
|
3.0 | PREDICTED: Elaeis guineensis putative rRNA methyltransferase YlbH (LOC105053467), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010934628.1 |
|
3.0 | PREDICTED: Elaeis guineensis putative rRNA methyltransferase YlbH (LOC105053467), transcript variant X2, mRNA | NA | coding protein | psRNATarget |