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BaseInfo

ncRNA ID ath-miRf10884-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCUGGGGGUCGAGUGAUGUG - NA
Stem-loop(if miRNA)                         --A G    CGA
GUCACUCAGCCUGGGGGUCGAGUG   U UGAU   G
||||||||||||||||||||||||   | ||||
UAGUGAGUUGGACCUUCAGCUCAU   A ACUG   U
                        AGA G    UGG
Stem-loop sequence GUCACUCAGCCUGGGGGUCGAGUGAUGUGAUCGAGUGGUGUCAGAAGAUACUCGACUUCCAGGUUGAGUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:20   GUGUAGUGAGCUGGGGGUCC   1
  ||||||||||||||||*|||
targets:1613   CACAUCACUCGACCCCGAGG   1632

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:20   GUGUAGUGAGCUGGGGGUCC   1
  *|*||||||||||||||*||
targets:1567   AAGAUCACUCGACCCCCUGG   1586

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
DQ069808.1
ncRNA:20   GUGUAGUGAGCUGGGGGUCC   1
  *|||*||||||||||||*||
targets:86   AACACCACUCGACCCCCUGG   105

2.5 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget
BT025674.1
ncRNA:20   GUGUAG-UGAGCUGGGGGUCC   1
  |*||||-||||||||||||||
targets:182   CCCAUCUACUCGACCCCCAGG   202

3.0 Arabidopsis thaliana NA coding protein psRNATarget