ncRNA ID | novel_egu_miR349 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:19664945-19665111 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042544;SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 144 - UUUGAAUGACGAAAAUACUCCUGC - 167 |
Stem-loop(if miRNA) |
--         C       CUC   C     -       AA  UU   CC    -G              AUA   --U    UU   UUUGAAUGA GAAAAUA   CUG UCUUU GAAAAAA  AU  CAU  UGUG  UAUAUUAUGAUAUU   CAU   GAAA  A   ||||||||| |||||||   ||| ||||| |||||||  ||  |||  ||||  ||||||||||||||   |||   ||||  U   AAAUUUACU CUUUUAU   GAC AGAAA CUUUUUU  UA  GUA  AUAU  GUAUAAUACUGUAG   GUA   CUUU  A UA         A       AAA   A     U       AG  UU   AA    AG              AAC   CGU    UA |
Stem-loop sequence | UUUGAAUGACGAAAAUACUCCUGCUCUUUGAAAAAAAAAUUUCAUCCUGUGGUAUAUUAUGAUAUUAUACAUUGAAAUUAUAAUUUUCUGCAUGCAAGAUGUCAUAAUAUGGAUAUAAAAUGUUAUGAUUUUUUCUAAAGAACAGAAAUAUUUUCAUCAUUUAAAAU |