Search result

BaseInfo

ncRNA ID novel_egu_miR349
Species Elaeis guineensis
Class miRNA
Genome position Chr15:19664945-19665111 [-]
Reference genome EG5
Source SRR5189967;SRR3042544;SRR3042545
Length 24
Mature sequence(if miRNA) 144 - UUUGAAUGACGAAAAUACUCCUGC - 167
Stem-loop(if miRNA) --         C       CUC   C     -       AA  UU   CC    -G              AUA   --U    UU
  UUUGAAUGA GAAAAUA   CUG UCUUU GAAAAAA  AU  CAU  UGUG  UAUAUUAUGAUAUU   CAU   GAAA  A
  ||||||||| |||||||   ||| ||||| |||||||  ||  |||  ||||  ||||||||||||||   |||   ||||  U
  AAAUUUACU CUUUUAU   GAC AGAAA CUUUUUU  UA  GUA  AUAU  GUAUAAUACUGUAG   GUA   CUUU  A
UA         A       AAA   A     U       AG  UU   AA    AG              AAC   CGU    UA
Stem-loop sequence UUUGAAUGACGAAAAUACUCCUGCUCUUUGAAAAAAAAAUUUCAUCCUGUGGUAUAUUAUGAUAUUAUACAUUGAAAUUAUAAUUUUCUGCAUGCAAGAUGUCAUAAUAUGGAUAUAAAAUGUUAUGAUUUUUUCUAAAGAACAGAAAUAUUUUCAUCAUUUAAAAU