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BaseInfo

ncRNA ID novel_egu_miR340
Species Elaeis guineensis
Class miRNA
Genome position Chr11:10882798-10882903 [-]
Reference genome EG5
Source SRR5189967;SRR3042545;SRR3042548
Length 24
Mature sequence(if miRNA) 83 - UGACAUCCUGUGGCAUAUUAUGAU - 106
Stem-loop(if miRNA) --       C  U   -                CA   A        U     U
  UGACAUC UG GGC AUAUUAUGAUAUUUUG  UCA AUUAUGAC UUCUG A
  ||||||| || ||| ||||||||||||||||  ||| |||||||| |||||
  ACUGUAG AC CCG UAUAAUACUGUAGGAU  AGU UAAUACUG AGGAC U
AU       A  -   A                CC   A        U     G
Stem-loop sequence UGACAUCCUGUGGCAUAUUAUGAUAUUUUGCAUCAAAUUAUGACUUUCUGUAUGCAGGAUGUCAUAAUAUGACCUAGGAUGUCAUAAUAUAGCCCAAGAUGUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019851713.1
ncRNA:24   UAGUAUUAUACGGUGUCCUACAGU   1
  =||*|||||||||||*|||||||*
targets:1696   GUCCUAAUAUGCCACUGGAUGUCU   1719

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105048955 (LOC105048955), mRNA NA coding protein psRNATarget