ncRNA ID | novel_egu_miR340 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:10882798-10882903 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042545;SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 83 - UGACAUCCUGUGGCAUAUUAUGAU - 106 |
Stem-loop(if miRNA) |
--       C  U   -                CA   A        U     U   UGACAUC UG GGC AUAUUAUGAUAUUUUG  UCA AUUAUGAC UUCUG A   ||||||| || ||| ||||||||||||||||  ||| |||||||| |||||   ACUGUAG AC CCG UAUAAUACUGUAGGAU  AGU UAAUACUG AGGAC U AU       A  -   A                CC   A        U     G |
Stem-loop sequence | UGACAUCCUGUGGCAUAUUAUGAUAUUUUGCAUCAAAUUAUGACUUUCUGUAUGCAGGAUGUCAUAAUAUGACCUAGGAUGUCAUAAUAUAGCCCAAGAUGUCAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019851713.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105048955 (LOC105048955), mRNA | NA | coding protein | psRNATarget |