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BaseInfo

ncRNA ID novel_egu_miR339
Species Elaeis guineensis
Class miRNA
Genome position Chr14:13876315-13876512 [-]
Reference genome EG5
Source SRR5189967;SRR3042544
Length 24
Mature sequence(if miRNA) 1 - GUAGUUUUGAAGUAGUAGAUCAUA - 24
Stem-loop(if miRNA) --UAU                        -AACU               -ACAU    C   UC          A          A  UAUC     UAUU
     UUUACUAUUUCAAAAUUAUUUGUA     AAAAGUUAUAUGAUU     AUCU UAG  UAUAUAUCAA UAGUCAAAAA UA    UAAUU    U
     ||||||||||||||||||||||||     |||||||||||||||     |||| |||  |||||||||| |||||||||| ||    |||||
     AGAUGAUGAAGUUUUGAUGAAUAU     UUUUUAGUAUACUAA     UAGA AUU  AUAUAUAGUU AUCAGUUUUU AU    AUUAA    U
AUACU                        GUAUU               ACUUC    A   GU          C          A  --CU     UUUU
Stem-loop sequence UAUUUUACUAUUUCAAAAUUAUUUGUAAACUAAAAGUUAUAUGAUUACAUAUCUCUAGUCUAUAUAUCAAAUAGUCAAAAAAUAUAUCUAAUUUAUUUUUUUUAAUUAUCUAAUUUUUGACUACUUGAUAUAUAUGUUAAAGAUCUUCAAAUCAUAUGAUUUUUUUAUGUAUAAGUAGUUUUGAAGUAGUAGAUCAUA