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BaseInfo

ncRNA ID novel_egu_miR336
Species Elaeis guineensis
Class miRNA
Genome position Chr1:22980218-22980268 [+]
Reference genome EG5
Source SRR5189967
Length 22
Mature sequence(if miRNA) 1 - UUUUUAAAAGCGUCGGUAGGUC - 22
Stem-loop(if miRNA) --    U          GU    CA
  UUUU AAAAGCGUCG  AGGU  G
  |||| ||||||||||  ||||  C
  AAAA UUUUCGUAGC  UCUA  A
CG    C          UG    AC
Stem-loop sequence UUUUUAAAAGCGUCGGUAGGUCAGCACAAUCUGUCGAUGCUUUUCAAAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010945667.1
ncRNA:22   CUGGAUGGCUGCGAAAAUUUUU   1
  |||||=|||||||||||||||=
targets:367   GACCUGCCGACGCUUUUAAAAG   388

2.0 PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA NA coding protein psRNATarget