Search result

BaseInfo

ncRNA ID	novel_egu_miR331
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:21269205-21269277 [+]
Reference genome	EG5
Source	SRR5189967;SRR3042548
Length	22
Mature sequence(if miRNA)	52 - UUCCCAAUCCCACCCAUUCCUA - 73
Stem-loop(if miRNA)	--        - AA   A      -   -CU     GU   GGAAUGGG G  GUU GGGAGU UCU   UACCU  C   |||||||| |  ||| |||||| |||   |||||   CCUUACCC C  UAA CCUUCA AGG   AUGGG  U AU        A CC   C      C   UGU     UC
Stem-loop sequence	GGAAUGGGGAAGUUAGGGAGUUCUCUUACCUGUCUCUGGGUAUGUGGACACUUCCCAAUCCCACCCAUUCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JO094301.1	ncRNA:22   AUCCUUACCCACCCUAACCCUU   1   |||||||||||||||||||||| targets:128   UAGGAAUGGGUGGGAUUGGGAA   149 Target Full Sequence	0.0	TSA: Elaeis guineensis isotig07044.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
XM_010937053.2	ncRNA:22   AUCCUUACCCACCCUAACCCUU   1   |*||*||||||||*|||||||| targets:730   UUGGUAUGGGUGGAAUUGGGAA   751 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis putative disease resistance protein RGA1 (LOC105055279), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019854089.1	ncRNA:22   AUCCUUACCCACCCUAACCCUU   1   |*||*||||||||*|||||||| targets:735   UUGGUAUGGGUGGAAUUGGGAA   756 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis putative disease resistance protein RGA1 (LOC105055279), transcript variant X1, mRNA	NA	coding protein	psRNATarget