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BaseInfo

ncRNA ID	novel_egu_miR323
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:4033-4233 [-]
Reference genome	EG5
Source	SRR5189967
Length	20
Mature sequence(if miRNA)	1 - GUUUAGGGUUUAGGGUUUAA - 20
Stem-loop(if miRNA)	-A      AG     A   G  ---           AUUUAG     -----       AG     AG   U AG         G      GA         AGG   GGAUUU  GAUCU AGG UA   GAGGAUUUAGG      GAUUC     AAAGUUU  GGUUC  GAU U  GAUUUUGGG UUUAGG  UUAGGAUUU   G   ||||||  ||||| ||| ||   |||||||||||      |||||     |||||||  |||||  ||| |  ||||||||| ||||||  |||||||||   UUUGGG  UUGGG UUU AU   UUUUUGGAUUU      UUAGG     UUUUAGG  UUAGG  UUG G  UUAGGAUUU GGAUUU  AGUUUUGGA   U AA      AU     A   G  AUU           --GGGA     GAUUU       AU     AU   C AU         G      AG         AUU
Stem-loop sequence	AGGAUUUAGGAUCUAAGGGUAGAGGAUUUAGGAUUUAGGAUUCAAAGUUUAGGGUUCAGGAUUUAGGAUUUUGGGGUUUAGGGAUUAGGAUUUAGGGUUUAAGGUUUUGAGAUUUAGGGUUUAGGAUUUAGCGUUUAGGAUUUAGGAUUUUUUUAGGGAUUAGGGUUUAGGUUUUUUUAUAGUUUAGGGUUUAGGGUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01037283.1	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   ||||||*||||||||||||| targets:118   UUAAACACUAAACCCUAAAC   137 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene19119_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010915958.2	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   **|||=|||||||||||||| targets:214   GAAAAUCCUAAACCCUAAAC   233 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At1g79490, mitochondrial (LOC105039704), mRNA	NA	coding protein	psRNATarget
XM_010937014.2	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   |*|||||||||||||*|||| targets:62   UAAAACCCUAAACCCGAAAC   81 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized protein At5g43822 (LOC105055245), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010907125.2	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   **||||||||||||||||*| targets:51   AGAAACCCUAAACCCUAACC   70 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis U3 snoRNP-associated protein-like YAOH (LOC105032630), mRNA	NA	coding protein	psRNATarget
GBSV01037058.1	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   **|||||||||||||*|||| targets:291   CGAAACCCUAAACCCCAAAC   310 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene18894_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01024121.1	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   |||=|=|||||||||||||= targets:355   UUAGAUCCUAAACCCUAAAU   374 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene5950_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010908486.2	ncRNA:20   AAUUUGGGAUUUGGGAUUUG   1   |**|=||||||||||||||| targets:1654   UCUAGCCCUAAACCCUAAAC   1673 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105033611 (LOC105033611), mRNA	NA	coding protein	psRNATarget