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BaseInfo

ncRNA ID novel_egu_miR321
Species Elaeis guineensis
Class miRNA
Genome position Chr13:12454059-12454135 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 54 - AGGAGAAGAAGAAGAGUUCUAGAG - 77
Stem-loop(if miRNA) --    UA           A  A       AAA     A
  CUAG  GAUUUUUUUUU UU UUUUUUU   UUUUA U
  ||||  ||||||||||| || |||||||   ||||| G
  GAUC  UUGAGAAGAAG AG GGAGAAA   AGAGU U
GA    --           A  A       GAG     A
Stem-loop sequence CUAGUAGAUUUUUUUUUAUUAUUUUUUUAAAUUUUAAUGUAUGAGAGAGAAAGAGGAGAAGAAGAAGAGUUCUAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010917300.2
ncRNA:24   GAGA-----UCUUGAGAAGAAGAAGAGGA   1
  ||=|-----||||||||||||=||||||*
targets:1715   CUUUUGACAAGAACUCUUCUUUUUCUCCC   1743

2.5 PREDICTED: Elaeis guineensis uncharacterized protein HI_0077 (LOC105040660), transcript variant X1, mRNA NA coding protein psRNATarget
GBSV01035776.1
ncRNA:24   GAGA-----UCUUGAGAAGAAGAAGAGGA   1
  ||=|-----||||||||||||=||||||*
targets:93   CUUUUGACAAGAACUCUUCUUUUUCUCCC   121

2.5 TSA: Elaeis guineensis Unigene17611_All transcribed RNA sequence NA coding protein psRNATarget
XM_010933342.2
ncRNA:24   GAGA-----UCUUGAGAAGAAGAAGAGGA   1
  =|=|-----||||=||||||||||||=||
targets:713   UUUUGGAUGAGAAUUCUUCUUCUUCUUCU   741

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105052511 (LOC105052511), mRNA NA coding protein psRNATarget
XM_010926777.2
ncRNA:24   GA-GAUCUUGAGAAGAAGAAGAGGA   1
  ||-||**|||||||=||||||||||
targets:250   CUGCUUCAACUCUUUUUCUUCUCCU   274

2.5 PREDICTED: Elaeis guineensis piriformospora indica-insensitive protein 2-like (LOC105047722), mRNA NA coding protein psRNATarget
XM_010920748.2
ncRNA:24   GAG----AUCUUGAGAAGAAGAAGAGGA   1
  =||----|=||*|||||||||||||=||
targets:180   UUCCGCAUGGAUCUCUUCUUCUUCUUCU   207

2.5 PREDICTED: Elaeis guineensis UMP-CMP kinase (LOC105043268), mRNA NA coding protein psRNATarget