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BaseInfo

ncRNA ID novel_egu_miR319
Species Elaeis guineensis
Class miRNA
Genome position Chr1:5679727-5679819 [-]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - GGAGAUCUGUGGAAAGGAUAGCAC - 24
Stem-loop(if miRNA) --   U     C  C    C    AUUUUUUAUUUUUUUUU   -   AAC
  GCU UCCUU CC UGGA CUCC                 GCU UCG   C
  ||| ||||| || |||| ||||                 ||| |||
  CGA AGGAA GG GUCU GAGG                 CGG GGC   C
CA   U     A  U    A    --------GUUUUUUUC   U   CUU
Stem-loop sequence GCUUUCCUUCCCCUGGACCUCCAUUUUUUAUUUUUUUUUGCUUCGAACCCUUCCGGUGGCCUUUUUUUGGGAGAUCUGUGGAAAGGAUAGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010936505.2
ncRNA:24   CA-CGAUAGGAAAGGUGUCUAGAGG   1
  ||-||**||||*|||||||||||||
targets:153   GUCGCCUUCCUCUCCACAGAUCUCC   177

2.0 PREDICTED: Elaeis guineensis uncharacterized LOC105054874 (LOC105054874), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010936504.1
ncRNA:24   CA-CGAUAGGAAAGGUGUCUAGAGG   1
  ||-||**||||*|||||||||||||
targets:159   GUCGCCUUCCUCUCCACAGAUCUCC   183

2.0 PREDICTED: Elaeis guineensis uncharacterized LOC105054874 (LOC105054874), transcript variant X1, mRNA NA coding protein psRNATarget
GBSV01021809.1
ncRNA:24   CA-CGAUAGGAAAGGUGUCUAGAGG   1
  ||-||**||||*|||||||||||||
targets:148   GUCGCCUUCCUCUCCACAGAUCUCC   172

2.0 TSA: Elaeis guineensis Unigene3637_All transcribed RNA sequence NA coding protein psRNATarget
XM_010940271.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:273   GUGCUCUCCUUCCCACAGAUCUCC   296

2.5 PREDICTED: Elaeis guineensis small subunit processome component 20 homolog (LOC105057615), mRNA NA coding protein psRNATarget
XM_010909436.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X3, mRNA NA coding protein psRNATarget
XM_010909435.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010909437.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:163   GUGCUUUCCUUCCCACAGAUCUCC   186

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X4, mRNA NA coding protein psRNATarget
XM_019846961.1
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010913021.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:344   GUGCUUUCCUUCCCACAGAUCUCC   367

2.5 PREDICTED: Elaeis guineensis cytochrome P450 71A1-like (LOC105037347), mRNA NA coding protein psRNATarget
XM_010923007.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X7, mRNA NA coding protein psRNATarget
XM_019850872.1
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X8, mRNA NA coding protein psRNATarget
XM_010909444.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X10, mRNA NA coding protein psRNATarget
XM_010909443.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X9, mRNA NA coding protein psRNATarget
XM_010909440.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X7, mRNA NA coding protein psRNATarget
XM_010923001.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:173   GUGCUUUCCUUCCCACAGAUCUCC   196

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010923005.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X4, mRNA NA coding protein psRNATarget
XM_010923003.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:173   GUGCUUUCCUUCCCACAGAUCUCC   196

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010923006.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X3, mRNA NA coding protein psRNATarget
XM_010909438.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X5, mRNA NA coding protein psRNATarget
XM_010909439.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X6, mRNA NA coding protein psRNATarget
XM_010923008.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X5, mRNA NA coding protein psRNATarget
XM_010923009.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:177   GUGCUUUCCUUCCCACAGAUCUCC   200

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X9, mRNA NA coding protein psRNATarget
XM_010923004.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:174   GUGCUUUCCUUCCCACAGAUCUCC   197

2.5 PREDICTED: Elaeis guineensis mediator of RNA polymerase II transcription subunit 27 (LOC105044914), transcript variant X6, mRNA NA coding protein psRNATarget
XM_010933568.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:170   GUGCUUUCCUUCCCACAGAUCUCC   193

2.5 PREDICTED: Elaeis guineensis mRNA cap guanine-N7 methyltransferase 1 (LOC105052667), mRNA NA coding protein psRNATarget
XM_010909442.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X8, mRNA NA coding protein psRNATarget
XM_010909445.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:162   GUGCUUUCCUUCCCACAGAUCUCC   185

2.5 PREDICTED: Elaeis guineensis RING finger protein B (LOC105034327), transcript variant X11, mRNA NA coding protein psRNATarget
XM_019853475.1
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||||*|||||*||||||||||||
targets:280   GUGCUUUCCUUCCCACAGAUCUCC   303

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC109506367 (LOC109506367), mRNA NA coding protein psRNATarget
XM_010936140.2
ncRNA:24   CACGAUAGGAAAGGUGUCUAGAGG   1
  |||*|*|||||*||||||||||||
targets:150   GUGGUUUCCUUCCCACAGAUCUCC   173

2.5 PREDICTED: Elaeis guineensis beclin-1-like protein (LOC105054595), mRNA NA coding protein psRNATarget
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