ncRNA ID | novel_egu_miR315 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr13:7154441-7154528 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AGAGAUCGCAUCUUGACAG - 19 |
Stem-loop(if miRNA) |
--        -      GACA   AAAAA         -    C   A   AGAGAUCG CAUCUU    GUU     UUUUCUUUU CUCU AAG C   |||||||| ||||||    |||     ||||||||| |||| ||| A   UCUUUAGU GUAGAA    UAA     AGAAGAAGA GAGA UUC C CA        A      -GAA   -----         A    -   U |
Stem-loop sequence | AGAGAUCGCAUCUUGACAGUUAAAAAUUUUCUUUUCUCUCAAGACACUCUUAGAGAAGAAGAAGAAAUAAGAAGAUGAUGAUUUCUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01038099.1 |
|
2.5 | TSA: Elaeis guineensis Unigene19935_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010915100.2 |
|
2.5 | PREDICTED: Elaeis guineensis GDSL esterase/lipase At4g26790-like (LOC105039102), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01033626.1 |
|
3.0 | TSA: Elaeis guineensis Unigene15459_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01034923.1 |
|
3.0 | TSA: Elaeis guineensis Unigene16756_All transcribed RNA sequence | NA | coding protein | psRNATarget |