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BaseInfo

ncRNA ID novel_egu_miR310
Species Elaeis guineensis
Class miRNA
Genome position Chr1:14035956-14036059 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 81 - AAUCAUAAUUUGAUGUAGGAUGUC - 104
Stem-loop(if miRNA) --     A              C   C  A CG  UA  A       A GAU
  CAUCC GCAUCAAAUUAUGA UUU UG A  UA  AU UCAUAAU U   C
  ||||| |||||||||||||| ||| || |  ||  || ||||||| |
  GUAGG UGUAGUUUAAUACU AAA AU U  GU  UA AGUAUUA A   C
CU     A              A   A  A AU  CC  C       A AAA
Stem-loop sequence CAUCCAGCAUCAAAUUAUGACUUUCUGAACGUAUAAUAUCAUAAUAUGAUCCAAAAAAUUAUGACAUCCUGUAUAUAAAAAAUCAUAAUUUGAUGUAGGAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010921573.2
ncRNA:24   CUGUAGGAUGUAGUUUAAUACUAA   1
  *|==**||||||||||||||||||
targets:605   AAUGAACUACAUCAAAUUAUGAUU   628

1.0 PREDICTED: Elaeis guineensis NAC domain-containing protein 72 (LOC105043851), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010921570.2
ncRNA:24   CUGUAGGAUGUAGUUUAAUACUAA   1
  *|==**||||||||||||||||||
targets:1206   AAUGAACUACAUCAAAUUAUGAUU   1229

1.0 PREDICTED: Elaeis guineensis NAC domain-containing protein 72 (LOC105043851), transcript variant X1, mRNA NA coding protein psRNATarget