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BaseInfo

ncRNA ID novel_egu_miR308
Species Elaeis guineensis
Class miRNA
Genome position Chr4:8525801-8525895 [+]
Reference genome EG5
Source SRR3042542
Length 21
Mature sequence(if miRNA) 75 - AAGAUGAUAUGAUUGGUAUGG - 95
Stem-loop(if miRNA) --         UG           CU  UAAUUUCCGUUCAUCAUAAG
  AUACCAAUU  AUCAUCUUAUU  GA                    C
  |||||||||  |||||||||||  ||
  UAUGGUUAG  UAGUAGAAUAA  AG                    U
GG         UA           -A  UAUCCGGUUAGUAGCACUGU
Stem-loop sequence AUACCAAUUUGAUCAUCUUAUUCUGAUAAUUUCCGUUCAUCAUAAGCUUGUCACGAUGAUUGGCCUAUGAAAAUAAGAUGAUAUGAUUGGUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JO097585.1
ncRNA:21   GGUAUGGUUAGUAUAGUAGAA   1
  =*|||=|||||||*|||||||
targets:767   UGAUAUCAAUCAUCUCAUCUU   787

2.5 TSA: Elaeis guineensis isotig10358.Elguifruit mRNA sequence NA coding protein psRNATarget