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BaseInfo

ncRNA ID novel_egu_miR304
Species Elaeis guineensis
Class miRNA
Genome position Chr1:13427513-13427554 [+]
Reference genome EG5
Source SRR5189967
Length 19
Mature sequence(if miRNA) 1 - AGAUUUGAUCUUUUGCAUG - 19
Stem-loop(if miRNA) --     U         - AU
  AGAUU GAUCUUUUG C  G
  ||||| ||||||||| |  U
  UCUAA UUGGGAAAU G  G
UG     U         U GG
Stem-loop sequence AGAUUUGAUCUUUUGCAUGUGGGGUUAAAGGGUUUAAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010908374.2
ncRNA:19   GUACGUUUUCUAGUUUAGA   1
  ||||||||||=||||||||
targets:1808   CAUGCAAAAGGUCAAAUCU   1826

1.5 PREDICTED: Elaeis guineensis autophagy-related protein 11 (LOC105033519), mRNA NA coding protein psRNATarget
XM_010944617.1
ncRNA:19   GUACGUUUUCUAGUUUAGA   1
  |||||=|=|||||||||||
targets:597   CAUGCGAGAGAUCAAAUCU   615

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105060777 (LOC105060777), mRNA NA coding protein psRNATarget
XM_019847266.1
ncRNA:19   GUACGUUUUCUAGUUUAGA   1
  |||*||=||||||||||||
targets:2601   CAUUCAGAAGAUCAAAUCU   2619

2.5 PREDICTED: Elaeis guineensis CST complex subunit CTC1 (LOC105039183), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010915241.2
ncRNA:19   GUACGUUUUCUAGUUUAGA   1
  |||*||=||||||||||||
targets:2613   CAUUCAGAAGAUCAAAUCU   2631

2.5 PREDICTED: Elaeis guineensis CST complex subunit CTC1 (LOC105039183), transcript variant X1, mRNA NA coding protein psRNATarget