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BaseInfo

ncRNA ID novel_egu_miR292
Species Elaeis guineensis
Class miRNA
Genome position Chr1:45670232-45670276 [-]
Reference genome EG5
Source SRR5189967
Length 22
Mature sequence(if miRNA) 24 - UGAAAUGUGCUGAUCCGUUUGU - 45
Stem-loop(if miRNA) --UG       C   UC    U
    AAAUGUG UGA  CGUU G
    ||||||| |||  |||| U
    UUUACAC AUU  GUAA G
GUGG       A   GA    A
Stem-loop sequence UGAAAUGUGCUGAUCCGUUUGUGAAAUGAGUUAACACAUUUGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01028232.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  **|||*||||||*|||||||||
targets:1536   UGAAAGGGAUCAUCACAUUUCA   1557

2.5 TSA: Elaeis guineensis Unigene10065_All transcribed RNA sequence NA coding protein psRNATarget
JO087373.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00125.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087367.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00119.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087368.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00120.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087362.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00114.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087370.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00122.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087361.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00113.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087364.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00116.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087359.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00111.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087366.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00118.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087371.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00123.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087363.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00115.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087360.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00112.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087369.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00121.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087358.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00110.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087365.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00117.Elguifruit mRNA sequence NA coding protein psRNATarget
JO087372.1
ncRNA:22   UGUUUGCCUAGUCGUGUAAAGU   1
  |==||=*|=|||||||||||||
targets:69   AUGAAUAGGUCAGCACAUUUCA   90

3.0 TSA: Elaeis guineensis isotig00124.Elguifruit mRNA sequence NA coding protein psRNATarget