Search result

BaseInfo

ncRNA ID novel_egu_miR291
Species Elaeis guineensis
Class miRNA
Genome position Chr1:46115255-46115329 [-]
Reference genome EG5
Source SRR5189967
Length 21
Mature sequence(if miRNA) 1 - UCAGGUCGAGUACACAGCAUG - 21
Stem-loop(if miRNA) --    -  G       -     C   --    C     A
  UGUU UG AUUCGAC UGAUA UUG  CUUG UUGUG C
  |||| || ||||||| ||||| |||  |||| ||||| A
  ACGA AC UGAGCUG ACUAU AAC  GAAC AACAC C
GU    C  A       G     -   AG    -     U
Stem-loop sequence UGUUUGGAUUCGACUGAUACUUGCUUGCUUGUGACACUCACAACAAGGACAAUAUCAGGUCGAGUACACAGCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01040890.1
ncRNA:21   GUACGACACAUGAGCUGGACU   1
  =|||||*||||||||||=|||
targets:133   UAUGCUAUGUACUCGACUUGA   153

2.5 TSA: Elaeis guineensis Unigene22730_All transcribed RNA sequence NA coding protein psRNATarget