ncRNA ID | novel_egu_miR289 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:9910911-9910981 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 20 |
Mature sequence(if miRNA) | 1 - ACUUGAGAGUGGGAGGCAAC - 20 |
Stem-loop(if miRNA) |
--AC     AG  -      AACU    A   AAAU     UUGAG  UG GGAGGC    GUUG GGU    U     |||||  || ||||||    |||| |||     AGCUU  GC CCUCUG    CAGC CCA    C GCUC     CA  A      GUUU    C   GUUA |
Stem-loop sequence | ACUUGAGAGUGGGAGGCAACUGUUGAGGUAAAUUCAUUGACCCCGACUUUGGUCUCCACGACUUCGACUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010932065.1 |
|
2.5 | PREDICTED: Elaeis guineensis zinc-finger homeodomain protein 4-like (LOC105051563), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01007256.1 |
|
2.5 | TSA: Elaeis guineensis CL2486.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |