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BaseInfo

ncRNA ID novel_egu_miR287
Species Elaeis guineensis
Class miRNA
Genome position Chr12:22760951-22761039 [+]
Reference genome EG5
Source SRR3042542;SRR3042542;SRR5189967;SRR3042544;SRR3042545;SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 1 - UCCACAGGCUUUCUUGAACUG - 21
Stem-loop(if miRNA) --    CA                G    U  --UUG     A  A
  UCCA  GGCUUUCUUGAACUGU AACU CU     GGUUC UC A
  ||||  |||||||||||||||| |||| ||     ||||| ||
  AGGU  CUGAAAGAACUUGAUA UUGG GA     CCAAG AG A
GA    AC                G    U  UUAAA     -  A
Stem-loop sequence UCCACAGGCUUUCUUGAACUGUGAACUUCUUUGGGUUCAUCAAAAGAGAACCAAAUUAGUGGUUGAUAGUUCAAGAAAGUCCAUGGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01047621.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:3   CCGUUCAAGAAAGCCUGUGGA   23

0.0 TSA: Elaeis guineensis Unigene29462_All transcribed RNA sequence NA coding protein psRNATarget
XM_010935621.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:712   CCGUUCAAGAAAGCCUGUGGA   732

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 10-like (LOC105054175), mRNA NA coding protein psRNATarget
XM_010942515.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:602   CCGUUCAAGAAAGCCUGUGGA   622

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 5-like (LOC105059273), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010945327.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:692   CCGUUCAAGAAAGCCUGUGGA   712

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 4 (LOC105061318), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010920878.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:776   CCGUUCAAGAAAGCCUGUGGA   796

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 10-like (LOC105043359), mRNA NA coding protein psRNATarget
XM_010942516.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:597   CCGUUCAAGAAAGCCUGUGGA   617

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 5-like (LOC105059273), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010945328.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:682   CCGUUCAAGAAAGCCUGUGGA   702

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 4 (LOC105061318), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010918877.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:685   CCGUUCAAGAAAGCCUGUGGA   705

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 1-like (LOC105041829), mRNA NA coding protein psRNATarget
XM_010934121.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:722   CCGUUCAAGAAAGCCUGUGGA   742

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 1-like (LOC105053097), mRNA NA coding protein psRNATarget
XM_010907934.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*|||||||||||||||||||
targets:609   CCGUUCAAGAAAGCCUGUGGA   629

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 5-like (LOC105033225), mRNA NA coding protein psRNATarget
XM_019846533.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  =*|||||||||||||||||||
targets:858   UCGUUCAAGAAAGCCUGUGGA   878

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 7-like (LOC105033096), mRNA NA coding protein psRNATarget
XM_010919997.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  =*|||||||||||||||||||
targets:1049   UCGUUCAAGAAAGCCUGUGGA   1069

0.0 PREDICTED: Elaeis guineensis growth-regulating factor 7-like (LOC105042702), mRNA NA coding protein psRNATarget
XM_010941616.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  *|||||||||||||*||||||
targets:550   AAGUUCAAGAAAGCAUGUGGA   570

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 1 (LOC105058633), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019855132.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  *|||||||||||||*||||||
targets:556   AAGUUCAAGAAAGCAUGUGGA   576

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 1 (LOC105058633), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019854461.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  *|||||||||||||*||||||
targets:626   AAGUUCAAGAAAGCAUGUGGA   646

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 1 (LOC105056439), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010938635.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  *|||||||||||||*||||||
targets:645   AAGUUCAAGAAAGCAUGUGGA   665

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 1 (LOC105056439), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010912061.2
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*||||||||||||*||||||
targets:780   CCGUUCAAGAAAGCAUGUGGA   800

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 3 (LOC105036298), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019847589.1
ncRNA:21   GUCAAGUUCUUUCGGACACCU   1
  |*||||||||||||*||||||
targets:793   CCGUUCAAGAAAGCAUGUGGA   813

1.5 PREDICTED: Elaeis guineensis growth-regulating factor 3 (LOC105036298), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010943653.2
ncRNA:21   GU--CAAGUUCUUUCGGACACCU   1
  ||--|||||||||||||||||||
targets:1027   CAUCGUUCAAGAAAGCCUGUGGA   1049

2.5 PREDICTED: Elaeis guineensis growth-regulating factor 6-like (LOC105060064), mRNA NA coding protein psRNATarget
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