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BaseInfo

ncRNA ID novel_egu_miR284
Species Elaeis guineensis
Class miRNA
Genome position Chr12:5079413-5079519 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - UCUGACUUUGCAAGUACUUGACUG - 24
Stem-loop(if miRNA) ----UC      U       C  G       CCAAAA   UUCCGUC     A    A
      UGACUU GCAAGUA UU ACUGUGC      GUC       ACUAA UUAA A
      |||||| ||||||| || |||||||      |||       ||||| ||||
      ACUGAA CGUUCGU GA UGACACG      UAG       UGAUU AAUU A
GGAGUC      -       U  G       AAACCA   -----UC     -    U
Stem-loop sequence UCUGACUUUGCAAGUACUUGACUGUGCCCAAAAGUCUUCCGUCACUAAAUUAAAAAUUUAAUUAGUCUGAUACCAAAGCACAGUGAGUUGCUUGCAAGUCACUGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01023209.1
ncRNA:24   GUCAGUUCAUGAACGUUUCAGUCU   1
  *|**=|||*|||||||||||||||
targets:416   AAAAUAAGAACUUGCAAAGUCAGA   439

1.0 TSA: Elaeis guineensis Unigene5038_All transcribed RNA sequence NA coding protein psRNATarget