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BaseInfo

ncRNA ID novel_egu_miR280
Species Elaeis guineensis
Class miRNA
Genome position Chr12:8915439-8915487 [-]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - AUUACCCUGUAGAUGAUCGUAGCA - 24
Stem-loop(if miRNA) ---C    AA     CA        
    AUGA  UAUCU  AGGGUAAUC
    ||||  |||||  ||||||||U
    UGCU  GUAGA  UCCCAUUAU
ACGA    -A     UG        
Stem-loop sequence CAUGAAAUAUCUCAAGGGUAAUCUUAUUACCCUGUAGAUGAUCGUAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010919798.2
ncRNA:24   ACGAUGCUAGUAGAUGUCCCAUUA   1
  |||*=*||||||||||||||||||
targets:506   UGCAGAGAUCAUCUACAGGGUAAU   529

1.0 PREDICTED: Elaeis guineensis uncharacterized LOC105042536 (LOC105042536), transcript variant X3, mRNA NA coding protein psRNATarget