Search result

BaseInfo

ncRNA ID novel_egu_miR277
Species Elaeis guineensis
Class miRNA
Genome position Chr1:26903349-26903440 [-]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AGGGAUAGAGAGAUGAGGGUCCGG - 24
Stem-loop(if miRNA) --     G   -      C   UA      ---   CA       G C
  GGACU UCA CUUUUU UUU  UUUUCC   AGU  UUGGCCG U A
  ||||| ||| |||||| |||  ||||||   |||  ||||||| |
  CCUGG AGU GAGAGA AGG  GAAAGG   UCA  AACCGGU G U
GG     G   A      U   GA      ACU   AG       G C
Stem-loop sequence GGACUGUCACUUUUUCUUUUAUUUUCCAGUCAUUGGCCGGUCAUCGGUGGCCAAGAACUUCAGGAAAGAGGGAUAGAGAGAUGAGGGUCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01028200.1
ncRNA:24   GGCCUGGGAGUAGAGAGAUAGGGA   1
  ||**|||||=||||||*|||||||
targets:511   CCUCACCCUUAUCUCUAUAUCCCU   534

2.5 TSA: Elaeis guineensis Unigene10033_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01027360.1
ncRNA:24   GGCCUGGGAGUAGAGAGAUAGGGA   1
  ||**||==||*|||||||||||||
targets:191   CCCAACUUUCUUCUCUCUAUCCCU   214

3.0 TSA: Elaeis guineensis Unigene9192_All transcribed RNA sequence NA coding protein psRNATarget