ncRNA ID | novel_egu_miR277 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:26903349-26903440 [-] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGAUAGAGAGAUGAGGGUCCGG - 24 |
Stem-loop(if miRNA) |
--     G   -      C   UA      ---   CA       G C   GGACU UCA CUUUUU UUU  UUUUCC   AGU  UUGGCCG U A   ||||| ||| |||||| |||  ||||||   |||  ||||||| |   CCUGG AGU GAGAGA AGG  GAAAGG   UCA  AACCGGU G U GG     G   A      U   GA      ACU   AG       G C |
Stem-loop sequence | GGACUGUCACUUUUUCUUUUAUUUUCCAGUCAUUGGCCGGUCAUCGGUGGCCAAGAACUUCAGGAAAGAGGGAUAGAGAGAUGAGGGUCCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01028200.1 |
|
2.5 | TSA: Elaeis guineensis Unigene10033_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01027360.1 |
|
3.0 | TSA: Elaeis guineensis Unigene9192_All transcribed RNA sequence | NA | coding protein | psRNATarget |