ncRNA ID | novel_egu_miR275 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:58890707-58890758 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAACGGAGUCGGGGAGAUGCGC - 24 |
Stem-loop(if miRNA) |
--     A  U    GU  G     CG   GUAUC UC CCUG  UU GUUUU  A   ||||| || ||||  || |||||   CGUAG AG GGGC  AG CAAAA  U CG     -  -    UG  G     AC |
Stem-loop sequence | GUAUCAUCUCCUGGUUUGGUUUUCGAUCAAAAACGGAGUCGGGGAGAUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01014875.1 |
|
0.0 | TSA: Elaeis guineensis CL5484.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01014876.1 |
|
0.0 | TSA: Elaeis guineensis CL5484.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget |