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BaseInfo

ncRNA ID novel_egu_miR275
Species Elaeis guineensis
Class miRNA
Genome position Chr1:58890707-58890758 [-]
Reference genome EG5
Source SRR5189967;SRR3042545
Length 24
Mature sequence(if miRNA) 1 - AAAAACGGAGUCGGGGAGAUGCGC - 24
Stem-loop(if miRNA) --     A  U    GU  G     CG
  GUAUC UC CCUG  UU GUUUU  A
  ||||| || ||||  || |||||
  CGUAG AG GGGC  AG CAAAA  U
CG     -  -    UG  G     AC
Stem-loop sequence GUAUCAUCUCCUGGUUUGGUUUUCGAUCAAAAACGGAGUCGGGGAGAUGCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01014875.1
ncRNA:24   CGCGUAGAGGGGCUGAGGCAAAAA   1
  ||||||||||||||||||||||||
targets:130   GCGCAUCUCCCCGACUCCGUUUUU   153

0.0 TSA: Elaeis guineensis CL5484.Contig1_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01014876.1
ncRNA:24   CGCGUAGAGGGGCUGAGGCAAAAA   1
  ||||||||||||||||||||||||
targets:88   GCGCAUCUCCCCGACUCCGUUUUU   111

0.0 TSA: Elaeis guineensis CL5484.Contig2_All transcribed RNA sequence NA coding protein psRNATarget