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BaseInfo

ncRNA ID novel_egu_miR274
Species Elaeis guineensis
Class miRNA
Genome position Chr11:21296821-21296889 [-]
Reference genome EG5
Source SRR5189967;SRR3042544
Length 24
Mature sequence(if miRNA) 46 - GGUGGUGGAGUGAGAGACAGACGC - 69
Stem-loop(if miRNA) --  -      AGU          CGCCGUA   UUA
  GG UGGUGG   GAGAGACAGA       UCA   G
  || ||||||   ||||||||||       |||
  CC ACCACU   UUCUUUGUUU       AGU   C
UA  G      --G          --CAAAA   UAC
Stem-loop sequence GGUGGUGGAGUGAGAGACAGACGCCGUAUCAUUAGCCAUUGAAAAACUUUGUUUCUUGUCACCAGCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010916753.2
ncRNA:24   CGCAGACAGAGAGUGAGGUGGUGG   1
  ***|=|*|||||||||||*|||||
targets:101   CAAUUUUUCUCUCACUCCUCCACC   124

2.5 PREDICTED: Elaeis guineensis DDT domain-containing protein DDR4 (LOC105040288), mRNA NA coding protein psRNATarget