ncRNA ID | novel_egu_miR272 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:60270272-60270346 [-] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGACUGGCGUAUCAGACAUA - 21 |
Stem-loop(if miRNA) |
--A        --        ----AAA    -A    AUU    GUUUGAUA  CCAGUCAG       UUUC  UCGU   G    ||||||||  ||||||||       ||||  ||||    CAGACUAU  GGUCAGUU       AGAG  AGCA   A AUA        GC        AUGUUCG    AG    GCU |
Stem-loop sequence | AGUUUGAUACCAGUCAGAAAUUUCAUCGUAUUGAUCGACGAGAGAGAGCUUGUAUUGACUGGCGUAUCAGACAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01017581.1 |
|
0.0 | TSA: Elaeis guineensis CL6684.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget |