Search result

BaseInfo

ncRNA ID novel_egu_miR272
Species Elaeis guineensis
Class miRNA
Genome position Chr1:60270272-60270346 [-]
Reference genome EG5
Source SRR5189967
Length 21
Mature sequence(if miRNA) 1 - UUGACUGGCGUAUCAGACAUA - 21
Stem-loop(if miRNA) --A        --        ----AAA    -A    AUU
   GUUUGAUA  CCAGUCAG       UUUC  UCGU   G
   ||||||||  ||||||||       ||||  ||||
   CAGACUAU  GGUCAGUU       AGAG  AGCA   A
AUA        GC        AUGUUCG    AG    GCU
Stem-loop sequence AGUUUGAUACCAGUCAGAAAUUUCAUCGUAUUGAUCGACGAGAGAGAGCUUGUAUUGACUGGCGUAUCAGACAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017581.1
ncRNA:21   AUACAGACUAUGCGGUCAGUU   1
  *||||||||||||||||||||
targets:93   CAUGUCUGAUACGCCAGUCAA   113

0.0 TSA: Elaeis guineensis CL6684.Contig2_All transcribed RNA sequence NA coding protein psRNATarget