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BaseInfo

ncRNA ID novel_egu_miR269
Species Elaeis guineensis
Class miRNA
Genome position Chr11:29058204-29058304 [-]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - UUAGAGAACAAUGGUACCGAGCAU - 24
Stem-loop(if miRNA) --  A   -      U        --A  AA  AG      G    UAAUGU
  GU CGG AUCAUU UUCUCUGA   UA  UG  UUUUCA UCUA      G
  || ||| |||||| ||||||||   ||  ||  |||||| ||||
  CG GCC UGGUAA AAGAGAUU   GU  AC  GAGAGU AGGU      A
UA  A   A      C        GUA  GG  GU      G    CAUAGA
Stem-loop sequence GUACGGAUCAUUUUUCUCUGAAUAAAUGAGUUUUCAGUCUAUAAUGUGAAGAUACUGGAGUGAGAGUGCAGGUGAUGUUAGAGAACAAUGGUACCGAGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JO095131.1
ncRNA:24   UACGAGCCAUGGUAACAAGAGAUU   1
  **|||=|*||=|||||||||||||
targets:997   UGGCUUGUUAUCAUUGUUCUCUAA   1020

3.0 TSA: Elaeis guineensis isotig07899.Elguifruit mRNA sequence NA coding protein psRNATarget