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BaseInfo

ncRNA ID novel_egu_miR265
Species Elaeis guineensis
Class miRNA
Genome position Chr11:23979542-23979634 [+]
Reference genome EG5
Source SRR5189967
Length 20
Mature sequence(if miRNA) 1 - GAGACUUCUCCGACGGUACU - 20
Stem-loop(if miRNA) --      -      AC  ----UAC   -   C  AGCUC    AG    A
  GAGACU UCUCCG  GG       UGU GGU GA     GAGA  UUGU C
  |||||| ||||||  ||       ||| ||| ||     ||||  |||| A
  UUUUGA AGAGGU  CC       ACA CCA CU     CUCU  AGCA U
CA      C      CU  UUCUCUU   A   -  -----    AA    G
Stem-loop sequence GAGACUUCUCCGACGGUACUGUGGUCGAAGCUCGAGAAGUUGUACAUGACGAAAUCUCUCACCAACAUUCUCUUCCUCUGGAGACAGUUUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017255.1
ncRNA:20   UCAUGGCAGCCUCUUCAGAG   1
  |*||||||||||||||||||
targets:312   AAUACCGUCGGAGAAGUCUC   331

1.0 TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01014608.1
ncRNA:20   UCAUGGCAGCCUCUUCAGAG   1
  =|||=|||||||||||*|||
targets:324   GGUAUCGUCGGAGAAGGCUC   343

2.5 TSA: Elaeis guineensis CL5372.Contig1_All transcribed RNA sequence NA coding protein psRNATarget