ncRNA ID | novel_egu_miR265 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:23979542-23979634 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GAGACUUCUCCGACGGUACU - 20 |
Stem-loop(if miRNA) |
--      -      AC  ----UAC   -   C  AGCUC    AG    A   GAGACU UCUCCG  GG       UGU GGU GA     GAGA  UUGU C   |||||| ||||||  ||       ||| ||| ||     ||||  |||| A   UUUUGA AGAGGU  CC       ACA CCA CU     CUCU  AGCA U CA      C      CU  UUCUCUU   A   -  -----    AA    G |
Stem-loop sequence | GAGACUUCUCCGACGGUACUGUGGUCGAAGCUCGAGAAGUUGUACAUGACGAAAUCUCUCACCAACAUUCUCUUCCUCUGGAGACAGUUUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01017255.1 |
|
1.0 | TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01014608.1 |
|
2.5 | TSA: Elaeis guineensis CL5372.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |