ncRNA ID | novel_egu_miR264 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:576080-576217 [-] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 115 - UUUUUUUUGGUUGAUCGGGCCACC - 138 |
Stem-loop(if miRNA) |
---        G  U         ACCA UGAGCGACCUCCGACACCCCCAUCGGCACGUGCCGAUGGCCG    UUUUUUUU GU GAUCGGGCC    G                                          C    |||||||| || |||||||||    |                                          C    GGGAAGGG UA CUAGCCUGG    G                                          A GAG        G  -         ---G GAGGGGUAGGGGGGGGAGGAGGGGUGGUCGUCGAGGCACGAU |
Stem-loop sequence | UUUUUUUUGGUUGAUCGGGCCACCAGUGAGCGACCUCCGACACCCCCAUCGGCACGUGCCGAUGGCCGCCAUAGCACGGAGCUGCUGGUGGGGAGGAGGGGGGGGAUGGGGAGGGGGUCCGAUCAUGGGGAAGGGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01027677.1 |
|
2.5 | TSA: Elaeis guineensis Unigene9510_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010940695.2 |
|
2.5 | PREDICTED: Elaeis guineensis NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (LOC105057959), mRNA | NA | coding protein | psRNATarget |