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BaseInfo

ncRNA ID novel_egu_miR262
Species Elaeis guineensis
Class miRNA
Genome position Chr11:21452330-21452448 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 96 - AGGGACUGAGGAGAGAAGAAGGGA - 119
Stem-loop(if miRNA) UUU   AA   -        --        AAG     -            -GCCU GG   U
   UCU  UCU UUUUCCUC  UCUUUUCC   UUUCU UUCUCUCACUUU     U  GAG U
   |||  ||| ||||||||  ||||||||   ||||| ||||||||||||     |  ||| C
   AGG  AGA GAGAGGAG  AGGGAAGG   GAAGA GAGGGGGUGAGG     G  UUC U
---   GA   A        UC        --A     A            UUUUU UU   G
Stem-loop sequence UUUUCUAAUCUUUUUCCUCUCUUUUCCAAGUUUCUUUCUCUCACUUUGCCUUGGGAGUUCUGCUUUUGUUUUUGGAGUGGGGGAGAAGAAGAGGAAGGGACUGAGGAGAGAAGAAGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010935412.2
ncRNA:24   AGGGAAGAAGAGAGGAGUCAGGGA   1
  ||||||||||||||||||||||||
targets:68   UCCCUUCUUCUCUCCUCAGUCCCU   91

0.0 PREDICTED: Elaeis guineensis uncharacterized LOC105054035 (LOC105054035), mRNA NA coding protein psRNATarget
XM_010942994.2
ncRNA:24   AG-GGAAGAAGAGAGGAGUCAGGGA   1
  ||-||||||*|||||||||*|||||
targets:126   UCUCCUUCUCCUCUCCUCAUUCCCU   150

2.5 PREDICTED: Elaeis guineensis endoplasmin homolog (LOC105059624), mRNA NA coding protein psRNATarget