ncRNA ID | novel_egu_miR262 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:21452330-21452448 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 96 - AGGGACUGAGGAGAGAAGAAGGGA - 119 |
Stem-loop(if miRNA) |
UUU   AA   -        --        AAG     -            -GCCU GG   U    UCU  UCU UUUUCCUC  UCUUUUCC   UUUCU UUCUCUCACUUU     U  GAG U    |||  ||| ||||||||  ||||||||   ||||| ||||||||||||     |  ||| C    AGG  AGA GAGAGGAG  AGGGAAGG   GAAGA GAGGGGGUGAGG     G  UUC U ---   GA   A        UC        --A     A            UUUUU UU   G |
Stem-loop sequence | UUUUCUAAUCUUUUUCCUCUCUUUUCCAAGUUUCUUUCUCUCACUUUGCCUUGGGAGUUCUGCUUUUGUUUUUGGAGUGGGGGAGAAGAAGAGGAAGGGACUGAGGAGAGAAGAAGGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010935412.2 |
|
0.0 | PREDICTED: Elaeis guineensis uncharacterized LOC105054035 (LOC105054035), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010942994.2 |
|
2.5 | PREDICTED: Elaeis guineensis endoplasmin homolog (LOC105059624), mRNA | NA | coding protein | psRNATarget |