ncRNA ID | novel_egu_miR261 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:20181583-20181718 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAGACUGGCUUAGACUUAUA - 21 |
Stem-loop(if miRNA) |
--                    A          C     AAA   UUGGAGUGGGUUGGCCCGAAUACG   UAAGACUGGCUUAGACUUAU AUUGUAAGAA CCAGA   UUA                        A   |||||||||||||||||||| |||||||||| |||||   |||   GUUCUGACCGAAUCUGGAUA UAAUAUUCUU GGUUU   UUG                        U UU                    C          A     --C   GUCGUGCAGAAAAAAAAAGAGGGA |
Stem-loop sequence | UAAGACUGGCUUAGACUUAUAAUUGUAAGAACCCAGAAAAUUAUUGGAGUGGGUUGGCCCGAAUACGAUAGGGAGAAAAAAAAAGACGUGCUGGUUCUUUGGAUUCUUAUAAUCAUAGGUCUAAGCCAGUCUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010925645.2 |
|
3.0 | PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At4g21170 (LOC105046899), mRNA | NA | coding protein | psRNATarget |