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BaseInfo

ncRNA ID novel_egu_miR261
Species Elaeis guineensis
Class miRNA
Genome position Chr11:20181583-20181718 [+]
Reference genome EG5
Source SRR5189967
Length 21
Mature sequence(if miRNA) 1 - UAAGACUGGCUUAGACUUAUA - 21
Stem-loop(if miRNA) --                    A          C     AAA   UUGGAGUGGGUUGGCCCGAAUACG
  UAAGACUGGCUUAGACUUAU AUUGUAAGAA CCAGA   UUA                        A
  |||||||||||||||||||| |||||||||| |||||   |||
  GUUCUGACCGAAUCUGGAUA UAAUAUUCUU GGUUU   UUG                        U
UU                    C          A     --C   GUCGUGCAGAAAAAAAAAGAGGGA
Stem-loop sequence UAAGACUGGCUUAGACUUAUAAUUGUAAGAACCCAGAAAAUUAUUGGAGUGGGUUGGCCCGAAUACGAUAGGGAGAAAAAAAAAGACGUGCUGGUUCUUUGGAUUCUUAUAAUCAUAGGUCUAAGCCAGUCUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010925645.2
ncRNA:21   AUAUUCAGAUUCGGUCAGAAU   1
  *|||**|=|||||||||||||
targets:842   AAUAUUUUUAAGCCAGUCUUA   862

3.0 PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At4g21170 (LOC105046899), mRNA NA coding protein psRNATarget