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BaseInfo

ncRNA ID novel_egu_miR259
Species Elaeis guineensis
Class miRNA
Genome position Chr9:12614284-12614343 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - AAGAUUUCUGAAUGUUGGAGCUGA - 24
Stem-loop(if miRNA) ---AA          U  UG         GU
     GAUUUCUGAA GU  GAGCUGAAA  C
     |||||||||| ||  |||||||||
     UUAAGGAUUU CA  CUUGACUUU  A
AACUC          -  GU         GU
Stem-loop sequence AAGAUUUCUGAAUGUUGGAGCUGAAAGUCAUGUUUCAGUUCUGACUUUAGGAAUUCUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01034323.1
ncRNA:24   AGUCGAGGUUGUAAGUCUUUAGAA   1
  ||--=||=|||*||||||||||||
targets:124   UC--UUCUAACCUUCAGAAAUCUU   145

2.5 TSA: Elaeis guineensis Unigene16156_All transcribed RNA sequence NA coding protein psRNATarget
XM_010932470.2
ncRNA:24   AGUCGAGGUUGUAAGUCUUUAGAA   1
  |==|*|||||**||||||||||||
targets:1475   UUGGAUCCAAAUUUCAGAAAUCUU   1498

2.5 PREDICTED: Elaeis guineensis MLO-like protein 4 (LOC105051837), mRNA NA coding protein psRNATarget