ncRNA ID | novel_egu_miR258 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr9:7321752-7321853 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 19 |
Mature sequence(if miRNA) | 84 - AGAUUUGAUCUAUUGCAUG - 102 |
Stem-loop(if miRNA) |
UCAAA     G     U     C  A       UUAAAUUUU   UU    A      GUAAU AGAUC GAUCU AU UUUAUUU         AAA  AUAU U      ||||| ||||| ||||| || |||||||         |||  ||||      CGUUA UCUAG UUAGA UA GGAUGGG         UUU  UAUG A --GUA     -     U     U  -       UUCAAGUCU   UU    U |
Stem-loop sequence | UCAAAGUAAUGAGAUCUGAUCUCAUAUUUAUUUUUAAAUUUUAAAUUAUAUAUAUGUAUUUUUUUCUGAACUUGGGUAGGAUUAGAUUUGAUCUAUUGCAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010944617.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105060777 (LOC105060777), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010930912.2 |
|
3.0 | PREDICTED: Elaeis guineensis RING-H2 finger protein ATL13-like (LOC105050768), mRNA | NA | coding protein | psRNATarget |