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BaseInfo

ncRNA ID novel_egu_miR254
Species Elaeis guineensis
Class miRNA
Genome position Chr9:16884801-16884855 [-]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - AGAUGAUUGGCUUUAGGAUAUAUU - 24
Stem-loop(if miRNA) --     G A      A          C
  UAUAU C UGGAGC CAAUCAUUUA A
  ||||| | |||||| |||||||||| A
  AUAUA G AUUUCG GUUAGUAGAU A
UU     G -      -          A
Stem-loop sequence UAUAUGCAUGGAGCACAAUCAUUUACAAAAUAGAUGAUUGGCUUUAGGAUAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019854688.1
ncRNA:24   UUA-UAUAGGAUUUCGGUUAGUAGA   1
  |||-=|=||||||||=|||||||||
targets:1538   AAUUGUGUCCUAAAGUCAAUCAUCU   1562

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105057712 (LOC105057712), transcript variant X4, mRNA NA coding protein psRNATarget