ncRNA ID | novel_egu_miR249 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr8:32102113-32102319 [+] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 184 - AUAAUUUGACUGUAGGAUGUCAUA - 207 |
Stem-loop(if miRNA) |
--            A              CC    UG   AA  A         -U  UCCAAAAC      -    GG   GC        -CA         U   UGAUAUUUUGUA UCAAAUUAUGACUU  UGCA  AUA  AA UCAUAAUUU  CU        UUAUAA AGAG  AAG  AUUUUUGU   UUAAAAAUU A   |||||||||||| ||||||||||||||  ||||  |||  || |||||||||  ||        |||||| ||||  |||  ||||||||   ||||||||| U   ACUGUAGGAUGU AGUUUAAUACUGAA  GCGU  UGU  UU AGUAUUAAA  GA        AGUAUU UUUC  UUC  UAAAAAUA   AAUUUUUAA A AU            C              -A    GU   CG  C         CU  UAUUUUAU      C    UU   UA        AUA         A |
Stem-loop sequence | UGAUAUUUUGUAAUCAAAUUAUGACUUCCUGCAUGAUAAAAAAUCAUAAUUUUCUUCCAAAACUUAUAAAGAGGGAAGGCAUUUUUGUCAUUAAAAAUUUAUAAAAUUUUUAAAUAAUAAAAAUAUCUUUUCUUUCUUAUGAUAUUUUAUAGUCAAAUUAUGACUUGCUGUUGUGCGAAAGUCAUAAUUUGACUGUAGGAUGUCAUA |