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BaseInfo

ncRNA ID novel_egu_miR249
Species Elaeis guineensis
Class miRNA
Genome position Chr8:32102113-32102319 [+]
Reference genome EG5
Source SRR5189967;SRR3042545
Length 24
Mature sequence(if miRNA) 184 - AUAAUUUGACUGUAGGAUGUCAUA - 207
Stem-loop(if miRNA) --            A              CC    UG   AA  A         -U  UCCAAAAC      -    GG   GC        -CA         U
  UGAUAUUUUGUA UCAAAUUAUGACUU  UGCA  AUA  AA UCAUAAUUU  CU        UUAUAA AGAG  AAG  AUUUUUGU   UUAAAAAUU A
  |||||||||||| ||||||||||||||  ||||  |||  || |||||||||  ||        |||||| ||||  |||  ||||||||   ||||||||| U
  ACUGUAGGAUGU AGUUUAAUACUGAA  GCGU  UGU  UU AGUAUUAAA  GA        AGUAUU UUUC  UUC  UAAAAAUA   AAUUUUUAA A
AU            C              -A    GU   CG  C         CU  UAUUUUAU      C    UU   UA        AUA         A
Stem-loop sequence UGAUAUUUUGUAAUCAAAUUAUGACUUCCUGCAUGAUAAAAAAUCAUAAUUUUCUUCCAAAACUUAUAAAGAGGGAAGGCAUUUUUGUCAUUAAAAAUUUAUAAAAUUUUUAAAUAAUAAAAAUAUCUUUUCUUUCUUAUGAUAUUUUAUAGUCAAAUUAUGACUUGCUGUUGUGCGAAAGUCAUAAUUUGACUGUAGGAUGUCAUA